MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Providencia alcalifaciens
WMus003.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 66
bases: 3,919,227 bps
CDS: 3,576
rRNA: 12
Repeat region:
tmRNA: 1
tRNA: 80
misc RNA:
Total features: 3,669
Total number of protein coding genes annotated/found:
3,576
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5002|JADGLZ010000005.1
SEQF5002_02483
Genome Viewer
NA
AA
567/189
937-371
D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase
SEQF5002|JADGLZ010000017.1
SEQF5002_00647
Genome Viewer
NA
AA
219/73
992-774
hypothetical protein
SEQF5002|JADGLZ010000021.1
SEQF5002_01432
Genome Viewer
NA
AA
738/246
1018-281
hypothetical protein
SEQF5002|JADGLZ010000005.1
SEQF5002_02484
Genome Viewer
NA
AA
1032/344
1107-2138
Methionine import ATP-binding protein MetN
SEQF5002|JADGLZ010000009.1
SEQF5002_03498
Genome Viewer
NA
AA
864/288
1172-309
Glutamate racemase
SEQF5002|JADGLZ010000024.1
SEQF5002_01449
Genome Viewer
NA
AA
1089/363
1234-146
hypothetical protein
SEQF5002|JADGLZ010000011.1
SEQF5002_00163
Genome Viewer
NA
AA
792/264
1236-2027
hypothetical protein
SEQF5002|JADGLZ010000004.1
SEQF5002_02185
Genome Viewer
NA
AA
825/275
1302-478
HTH-type transcriptional regulator HdfR
SEQF5002|JADGLZ010000003.1
SEQF5002_01870
Genome Viewer
NA
AA
522/174
1316-795
Isopentenyl-diphosphate Delta-isomerase
SEQF5002|JADGLZ010000019.1
SEQF5002_00674
Genome Viewer
NA
AA
450/150
1333-884
hypothetical protein
SEQF5002|JADGLZ010000008.1
SEQF5002_03289
Genome Viewer
NA
AA
219/73
1359-1577
hypothetical protein
SEQF5002|JADGLZ010000012.1
SEQF5002_00326
Genome Viewer
NA
AA
783/261
1363-581
Cell division coordinator CpoB
SEQF5002|JADGLZ010000004.1
SEQF5002_02186
Genome Viewer
NA
AA
339/113
1420-1758
hypothetical protein
SEQF5002|JADGLZ010000002.1
SEQF5002_01456
Genome Viewer
NA
AA
567/189
1422-856
hypothetical protein
SEQF5002|JADGLZ010000025.1
SEQF5002_01451
Genome Viewer
NA
AA
1248/416
1444-197
hypothetical protein
SEQF5002|JADGLZ010000001.1
SEQF5002_00687
Genome Viewer
NA
AA
312/104
1517-1828
hypothetical protein
SEQF5002|JADGLZ010000007.1
SEQF5002_03023
Genome Viewer
NA
AA
558/186
1563-2120
hypothetical protein
SEQF5002|JADGLZ010000015.1
SEQF5002_00559
Genome Viewer
NA
AA
978/326
1592-2569
Bifunctional ligase/repressor BirA
SEQF5002|JADGLZ010000002.1
SEQF5002_01457
Genome Viewer
NA
AA
264/88
1685-1422
hypothetical protein
SEQF5002|JADGLZ010000021.1
SEQF5002_01433
Genome Viewer
NA
AA
240/80
1782-1543
hypothetical protein
🡄
Items 21 - 40
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of 179 pages
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* Click GI, UID, Gene Product to go to NCBI record
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Page last updated: July 7, 2021 08:39:35
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